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Assessment of Colorimetric Reporter Enzymes in the PURE System

Caitlin E. Sharpes, John B. McManus, Steven M. Blum, Glory E. Mgboji, Matthew W. Lux

2021ACS Synthetic Biology21 citationsDOIOpen Access PDF

Abstract

Colorimetric reporter enzymes are useful for generating eye-readable biosensor readouts that do not require a device to interpret, an attractive property for applications in remote or developing parts of the world. The use of cell-free gene expression further facilitates such applications via amenability to lyophilization and incorporation into materials like paper. Currently, detection of multiple analytes simultaneously with these systems requires multiple reactions or a device. Here we evaluate seven enzymes and 15 corresponding substrates for functionality in a particular cell-free expression system known as PURE. We report eight enzyme/substrate pairs spanning four enzymes that are compatible with PURE. Of the four enzymes, three pairings exhibit no cross-reactivity. We finally show that at least one pairing can be used to create a third color when both are present, highlighting the potential use of these reporters for multiplex sensing.

Topics & Concepts

MultiplexEnzymeBiosensorSubstrate (aquarium)AnalyteComputational biologyPairingComputer scienceReporter geneCombinatorial chemistryBiochemistryChemistryBiological systemNanotechnologyBiochemical engineeringBiologyGeneGene expressionMaterials scienceChromatographyBioinformaticsPhysicsEngineeringQuantum mechanicsSuperconductivityEcologyRNA and protein synthesis mechanismsCRISPR and Genetic EngineeringAdvanced biosensing and bioanalysis techniques
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