Detecting chromosomal interactions in Capture Hi-C data with CHiCAGO and companion tools
Paula Freire-Pritchett, Helen Ray-Jones, Monica Della Rosa, Chris Eijsbouts, William R. Orchard, Steven Wingett, Chris Wallace, Jonathan Cairns, Mikhail Spivakov, Valeriya Malysheva
Topics & Concepts
BespokeWorkflowPreprocessorComputer scienceDownstream (manufacturing)Pipeline (software)Normalization (sociology)Automatic identification and data captureComputational biologyData miningBioconductorChromosome conformation captureArtificial intelligenceProgramming languageDatabaseBiologyEnhancerGeneBiochemistryAnthropologyEconomicsPolitical scienceOperations managementSpeech recognitionGene expressionLawSociologyGenomics and Chromatin DynamicsGene expression and cancer classificationChromosomal and Genetic Variations