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Citrate metabolism controls the senescent microenvironment via the remodeling of pro-inflammatory enhancers

Kan Etoh, Hirotaka Araki, Tomoaki Koga, Yuko Hino, Kanji Kuribayashi, Shinjiro Hino, Mitsuyoshi Nakao

2024Cell Reports22 citationsDOIOpen Access PDF

Abstract

The senescent microenvironment and aged cells per se contribute to tissue remodeling, chronic inflammation, and age-associated dysfunction. However, the metabolic and epigenomic bases of the senescence-associated secretory phenotype (SASP) remain largely unknown. Here, we show that ATP-citrate lyase (ACLY), a key enzyme in acetyl-coenzyme A (CoA) synthesis, is essential for the pro-inflammatory SASP, independent of persistent growth arrest in senescent cells. Citrate-derived acetyl-CoA facilitates the action of SASP gene enhancers. ACLY-dependent de novo enhancers augment the recruitment of the chromatin reader BRD4, which causes SASP activation. Consistently, specific inhibitions of the ACLY-BRD4 axis suppress the STAT1-mediated interferon response, creating the pro-inflammatory microenvironment in senescent cells and tissues. Our results demonstrate that ACLY-dependent citrate metabolism represents a selective target for controlling SASP designed to promote healthy aging.

Topics & Concepts

InflammationATP citrate lyaseCell biologyEnhancerBone remodelingChromatin remodelingBiologyLipid metabolismProinflammatory cytokineAcetylationArginaseSenescenceEpigeneticsChemistryBiochemistryEnzymeCitrate synthaseGene expressionImmunologyGeneEndocrinologyArginineAmino acidTelomeres, Telomerase, and SenescenceRNA regulation and diseaseRNA Interference and Gene Delivery