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Application of Gaussian process regression as a surrogate modeling method to assess the dynamics of COVID-19 propagation

Alexandra Matveeva, Vasiliy N. Leonenko

2022Procedia Computer Science12 citationsDOIOpen Access PDF

Abstract

In this research, we aimed to assess the possibility of using surrogate modeling methods to replace time-consuming calculations related to modeling of COVID-19 dynamics. The Gaussian process regression (GPR) was used as a surrogate to replace detailed simulations by a COVID-19 multiagent model. Experiments were conducted with various kernels, as a result, in accordance with the quality metrics of the models, kernels were identified in which the surrogate gives the most accurate result (Rational Quadratic kernel and Additive kernel). It was demonstrated that by smoothing the dynamics of COVID-19 propagation, it is possible to achieve greater accuracy in GPR training. The obtained results prove the potential possibility of using surrogate modeling methods to conduct an uncertainty quantification of the multiagent model of COVID-19 propagation.

Topics & Concepts

Computer scienceKrigingSurrogate modelGaussian processKernel (algebra)Coronavirus disease 2019 (COVID-19)Process (computing)SmoothingGaussianMachine learningSurrogate dataRegressionArtificial intelligenceMathematical optimizationStatisticsMathematicsNonlinear systemPathologyPhysicsInfectious disease (medical specialty)Computer visionDiseaseCombinatoricsOperating systemMedicineQuantum mechanicsGaussian Processes and Bayesian InferenceModel Reduction and Neural NetworksCOVID-19 epidemiological studies