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Spectral Embedding of Weighted Graphs

Ian Gallagher, A. Jones, Anna Bertiger, Carey E. Priebe, Patrick Rubin‐Delanchy

2023Journal of the American Statistical Association15 citationsDOIOpen Access PDF

Abstract

When analyzing weighted networks using spectral embedding, a judicious transformation of the edge weights may produce better results. To formalize this idea, we consider the asymptotic behavior of spectral embedding for different edge-weight representations, under a generic low rank model. We measure the quality of different embeddings — which can be on entirely different scales — by how easy it is to distinguish communities, in an information-theoretic sense. For common types of weighted graphs, such as count networks or p-value networks, we find that transformations such as tempering or thresholding can be highly beneficial, both in theory and in practice.

Topics & Concepts

EmbeddingMathematicsTransformation (genetics)Enhanced Data Rates for GSM EvolutionMeasure (data warehouse)Rank (graph theory)Theoretical computer scienceThresholdingValue (mathematics)Computer scienceDiscrete mathematicsArtificial intelligenceCombinatoricsStatisticsData miningChemistryBiochemistryImage (mathematics)GeneComplex Network Analysis TechniquesAdvanced Graph Neural NetworksGraph theory and applications
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