Integrative Analysis of Proteome and Transcriptome Dynamics during Bacillus subtilis Spore Revival
Bhagyashree N. Swarge, Wishwas Abhyankar, Martijs J. Jonker, Huub C. J. Hoefsloot, Gertjan Kramer, Peter Setlow, Stanley Brul, Leo J. de Koning
Abstract
spore germination and outgrowth. The transcriptome analysis has additionally allowed us to trace gene expression during this transformation process. For the first time, the basic survival kit for spore-based life has been identified. In addition, in this analysis based on monitoring of protein levels in germinating and outgrowing spores, the transition from (ribo)nucleotide and amino acid biosynthesis to the restoration of all metabolic pathways can be clearly seen. The integrative multi-omics approach applied in this study thus has helped us to achieve a comprehensive overview of the molecular mechanisms at the basis of spore germination and outgrowth as well as to identify important knowledge gaps in need of further study.