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Advances in mass spectrometry-based approaches for characterizing monoclonal antibodies: resolving structural complexity and analytical challenges

Abhik Mojumdar, Hee-Jin Yoo, Duck‐Hyun Kim, Ji‐Won Park, Sujin Park, Eunji Jeon, Sunhee Choi, Jung Hoon Choi, Moonhee Park, Geul Bang, Kun Cho

2024Journal of Analytical Science & Technology14 citationsDOIOpen Access PDF

Abstract

Abstract Mass spectrometry (MS)-based intact mass analysis and structural characterization of biotherapeutic proteins such as monoclonal antibodies (mAbs) are a crucial characterization approach from upstream drug development to downstream product analysis. Due to various endogenous modifications leading to the structural heterogeneity and several N -linked glycan species resulting in macro-heterogeneity, it is challenging to characterize the mAbs. Hence, it is essential to understand the micro-heterogeneity of such proteins with high level of complexity which may vary in charge, size, or hydrophobicity. The development of high-throughput native separation techniques hyphenated with MS with high sensitivity and excellent mass accuracy has improved the top/middle down analysis, intact mass detection, subunit analysis, enhanced sequence coverage, and accurate localization of site-specific modifications. In this review, we have focused on the critical inroads taken for the improvement in MS-based techniques to resolve the challenges related to analysis of mAbs. Various MS-based techniques and their role in high-order structural analysis and the progress in software development have been explained, and further, the challenges remaining have been discussed. Graphical Abstract

Topics & Concepts

Monoclonal antibodyMass spectrometryComputational biologyChemistryCharacterization (materials science)Upstream (networking)Protein subunitComputer scienceNanotechnologyBiologyChromatographyBiochemistryMaterials scienceAntibodyGeneticsComputer networkGeneMass Spectrometry Techniques and ApplicationsAnalytical Chemistry and ChromatographyProtein purification and stability