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Comprehensive analysis of spatial architecture in primary liver cancer

Rui Wu, Wenbo Guo, Xinyao Qiu, Shicheng Wang, Chengjun Sui, Qiuyu Lian, Jianmin Wu, Yiran Shan, Yang Zhao, Shuai Yang, Tong Wu, Kaiting Wang, Yanjing Zhu, Shan Wang, Changyi Liu, Yangqianwen Zhang, Bo Zheng, Zhixuan Li, Yani Zhang, Siyun Shen, Yan Zhao, Wenwen Wang, Jinxia Bao, Ji Hu, Xuan Wu, Xiaoqing Jiang, Hongyang Wang, Jin Gu, Lei Chen

2021Science Advances363 citationsDOIOpen Access PDF

Abstract

cancer stem cell niches are related to TME remodeling and tumor metastasis. Last, we proposed a TLS-50 signature to accurately locate tertiary lymphoid structures (TLSs) spatially and unveiled that the distinct composition of TLSs is shaped by their distance to tumor cells. Our study provides previous unknown insights into the diverse tumor ecosystem of PLCs and has potential benefits for cancer intervention.

Topics & Concepts

CancerArchitecturePrimary (astronomy)Computer sciencePrimary cancerComputational biologyBiologyMedicineGeographyInternal medicineAstronomyArchaeologyPhysicsSingle-cell and spatial transcriptomicsGene expression and cancer classificationBioinformatics and Genomic Networks