Litcius/Paper detail

Genome of a novel <i>Sediminibacterium</i> discovered in association with two species of freshwater cyanobacteria from streams in Southern California

Arun Sethuraman, Rosalina Stancheva, Ciara Sanders, Lakme Caceres, David J. Castro, Hannah Hausknecht-Buss, Simone Henry, Haven Johansen, Antolette Kasler, Sandy Lastor, Isabelle Massaro, Immanuel Mekuria, Andrea Moron-Solano, Niki Read, Gretchen Vengerova, Andrew Zhang, Xiaoyu Zhang, Betsy Read

2022G3 Genes Genomes Genetics14 citationsDOIOpen Access PDF

Abstract

Here, we report the discovery of a novel Sediminibacterium sequenced from laboratory cultures of freshwater stream cyanobacteria from sites in Southern California, grown in BG11 medium. Our genome-wide analyses reveal a highly contiguous and complete genome (97% BUSCO) that is placed within sediminibacterial clades in phylogenomic analyses. Functional annotation indicates the presence of genes that could be involved in mutualistic/commensal relationship with associated cyanobacterial hosts.

Topics & Concepts

CyanobacteriaSTREAMSEcologyAssociation (psychology)GeographyBiologyGenomeGeneticsBacteriaPsychologyGeneComputer sciencePsychotherapistComputer networkMicrobial Community Ecology and PhysiologyProtist diversity and phylogenyAquatic Ecosystems and Phytoplankton Dynamics
Genome of a novel <i>Sediminibacterium</i> discovered in association with two species of freshwater cyanobacteria from streams in Southern California | Litcius