Litcius/Paper detail

The lipidomics reporting checklist a framework for transparency of lipidomic experiments and repurposing resource data

Dominik Kopczynski, Christer S. Ejsing, Jeffrey G. McDonald, Takeshi Bamba, Erin Baker, Justine Bertrand‐Michel, Britta Brügger, Cristina Coman, Shane R. Ellis, Timothy J. Garrett, William J. Griffiths, Xue Li Guan, Xianlin Han, Marcus Höring, Michal Holčapek, Nils Hoffmann, Kevin Huynh, Rainer Lehmann, Jace W. Jones, Rima Kaddurah‐Daouk, Harald Köfeler, Peter J. Meikle, Thomas Metz, Valerie B. O’Donnell, Daisuke Saigusa, Dominik Schwudke, Andrej Shevchenko, Federico Torta, Juan Antonio Vizcaíno, Ruth Welti, Markus R. Wenk, Denise Wolrab, Yu Xia, Kim Ekroos, Robert Ahrends, Gerhard Liebisch

2024Journal of Lipid Research46 citationsDOIOpen Access PDF

Abstract

The rapid increase in lipidomic studies has led to a collaborative effort within the community to establish standards and criteria for producing, documenting, and disseminating data. Creating a dynamic easy-to-use checklist that condenses key information about lipidomic experiments into common terminology will enhance the field's consistency, comparability, and repeatability. Here, we describe the structure and rationale of the established Lipidomics Minimal Reporting Checklist to increase transparency in lipidomics research.

Topics & Concepts

LipidomicsChecklistComparabilityTransparency (behavior)TerminologyRepurposingConsistency (knowledge bases)Computer scienceData scienceBioinformaticsBiologyMathematicsPaleontologyCombinatoricsPhilosophyEcologyComputer securityLinguisticsArtificial intelligenceMetabolomics and Mass Spectrometry StudiesAdvanced Proteomics Techniques and ApplicationsGenetics, Bioinformatics, and Biomedical Research