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Characterization of ancestral Fe/Mn superoxide dismutases indicates their cambialistic origin

Rosario Valenti, Jagoda Jabłońska, Dan S. Tawfik

2022Protein Science28 citationsDOIOpen Access PDF

Abstract

Superoxide dismutases (SODs) are critical metalloenzymes mitigating the damages of the modern oxygenated world. However, the emergence of one family of SODs, the Fe/Mn SOD, has been recurrently proposed to predate the great oxygenation event (GOE). This ancient family lacks metal binding selectivity, but displays strong catalytic selectivity. Therefore, some homologues would only be active when bound to Fe or Mn, although others, dubbed cambialistic, would function when loaded with either ion. This posed the longstanding question about the identity of the cognate metal ion of the first SODs to emerge. In this work, we utilize ancestral sequence reconstruction techniques to infer the earliest SODs. We show that the "ancestors" are active in vivo and in vitro. Further, we test their metal specificity and demonstrate that they are cambialistic in nature. Our findings shed light on how the predicted Last Common Universal Ancestor was capable of dealing with decomposition of the superoxide anion, and the early relationship between life, oxygen, and metal ion availability.

Topics & Concepts

Superoxide dismutaseCharacterization (materials science)ChemistryBiologyEvolutionary biologyCrystallographyBiochemistryMaterials scienceEnzymeNanotechnologyMetal-Catalyzed Oxygenation MechanismsRadioactive element chemistry and processingMetalloenzymes and iron-sulfur proteins