In-vitro and computational analysis of Urolithin-A for anti-inflammatory activity on Cyclooxygenase 2 (COX-2)
Archana G. Revankar, Zabin K. Bagewadi, Ibrahim Ahmed Shaikh, Basheerahmed Abdulaziz Mannasaheb, Mohammed M. Ghoneim, Aejaz Abdullatif Khan, Syed Mohammed Basheeruddin Asdaq
Abstract
Cyclooxygenase 2 (COX-2) participates in the inflammation process by converting arachidonic acid into prostaglandin G2 which increases inflammation, pain and fever. COX-2 has an active site and a heme pocket and blocking these sites stops the inflammation. Urolithin A is metabolite of ellagitannin produced from humans and animals gut microbes. In the current study, Urolithin A showed good pharmacokinetic properties. Molecular docking of the complex of Urolithin A and COX-2 revealed the ligand affinity of -7.97 kcal/mol with the ligand binding sites at TYR355, PHE518, ILE517 and GLN192 with the 4-H bonds at a distance of 2.8Å, 2.3 Å, 2.5 Å and 1.9 Å. The RMSD plot for Urolithin A and COX-2 complex was observed to be constant throughout the duration of dynamics. A total of 3 pair of hydrogen bonds was largely observed on average of 3 simulation positions for dynamics duration of 500ns. The MMPBSA analysis showed that active site amino acids had a binding energy of -22.0368kJ/mol indicating that throughout the simulation the protein of target was bounded by Urolithin A. In-silico results were validated by biological assays. Urolithin A strongly revealed to exhibit anti-inflammatory effect on COX-2 with an IC50 value of 44.04µg/mL. The anti-inflammatory capability was also depicted through reduction of protein denaturation that showed 37.6±0.1 % and 43.2±0.07 % reduction of protein denaturation for BSA and egg albumin respectively at 500µg/mL. The present study, suggests Urolithin A to be an effective anti-inflammatory compound for therapeutic use.