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Multivariate genome-wide analysis of aging-related traits identifies novel loci and new drug targets for healthy aging

Daniel B. Rosoff, Lucas A. Mavromatis, Andrew S. Bell, Josephin Wagner, Jeesun Jung, Riccardo E. Marioni, George Davey Smith, Steve Horvath, Falk W. Lohoff

2023Nature Aging73 citationsDOIOpen Access PDF

Abstract

Abstract The concept of aging is complex, including many related phenotypes such as healthspan, lifespan, extreme longevity, frailty and epigenetic aging, suggesting shared biological underpinnings; however, aging-related endpoints have been primarily assessed individually. Using data from these traits and multivariate genome-wide association study methods, we modeled their underlying genetic factor (‘mvAge’). mvAge (effective n = ~1.9 million participants of European ancestry) identified 52 independent variants in 38 genomic loci. Twenty variants were novel (not reported in input genome-wide association studies). Transcriptomic imputation identified age-relevant genes, including VEGFA and PHB1 . Drug-target Mendelian randomization with metformin target genes showed a beneficial impact on mvAge ( P value = 8.41 × 10 −5 ). Similarly, genetically proxied thiazolidinediones ( P value = 3.50 × 10 −10 ), proprotein convertase subtilisin/kexin 9 inhibition ( P value = 1.62 × 10 −6 ), angiopoietin-like protein 4, beta blockers and calcium channel blockers also had beneficial Mendelian randomization estimates. Extending the drug-target Mendelian randomization framework to 3,947 protein-coding genes prioritized 122 targets. Together, these findings will inform future studies aimed at improving healthy aging.

Topics & Concepts

Mendelian randomizationBiologyGenome-wide association studyGeneticsPCSK9GenePhenotypeEpigeneticsLongevityImputation (statistics)Computational biologyBioinformaticsSingle-nucleotide polymorphismGenetic variantsGenotypeEndocrinologyLDL receptorMissing dataCholesterolComputer scienceMachine learningLipoproteinGenetic Associations and EpidemiologyEpigenetics and DNA MethylationGenetics and Neurodevelopmental Disorders