Litcius/Paper detail

Norovirus–glycan interactions — how strong are they really?

Thomas Peters, Robert Creutznacher, Thorben Maass, Alvaro Mallagaray, Patrick Ogrissek, Stefan Taube, Lars Thiede, Charlotte Uetrecht

2021Biochemical Society Transactions15 citationsDOIOpen Access PDF

Abstract

Infection with human noroviruses requires attachment to histo blood group antigens (HBGAs) via the major capsid protein VP1 as a primary step. Several crystal structures of VP1 protruding domain dimers, so called P-dimers, complexed with different HBGAs have been solved to atomic resolution. Corresponding binding affinities have been determined for HBGAs and other glycans exploiting different biophysical techniques, with mass spectrometry (MS) and nuclear magnetic resonance (NMR) spectroscopy being most widely used. However, reported binding affinities are inconsistent. At the extreme, for the same system MS detects binding whereas NMR spectroscopy does not, suggesting a fundamental source of error. In this short essay, we will explain the reason for the observed differences and compile reliable and reproducible binding affinities. We will then highlight how a combination of MS techniques and NMR experiments affords unique insights into the process of HBGA binding by norovirus capsid proteins.

Topics & Concepts

CapsidChemistryNuclear magnetic resonance spectroscopyAffinitiesPlasma protein bindingBinding affinitiesBinding siteMass spectrometrySpectroscopyBiophysicsBinding domainTwo-dimensional nuclear magnetic resonance spectroscopyBinding pocketProtein structureCrystallographyCapsomereHeteronuclear single quantum coherence spectroscopyNorovirusStructural biologyStereochemistryGlycanHEK 293 cellsViral gastroenteritis research and epidemiologyVirus-based gene therapy researchInfant Nutrition and Health