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Generalized parallel tempering on Bayesian inverse problems

Jonas Latz, Juan P. Madrigal-Cianci, Fabio Nobile, Raúl Tempone

2021Statistics and Computing12 citationsDOIOpen Access PDF

Abstract

Abstract In the current work we present two generalizations of the Parallel Tempering algorithm in the context of discrete-time Markov chain Monte Carlo methods for Bayesian inverse problems. These generalizations use state-dependent swapping rates, inspired by the so-called continuous time Infinite Swapping algorithm presented in Plattner et al. (J Chem Phys 135(13):134111, 2011). We analyze the reversibility and ergodicity properties of our generalized PT algorithms. Numerical results on sampling from different target distributions, show that the proposed methods significantly improve sampling efficiency over more traditional sampling algorithms such as Random Walk Metropolis, preconditioned Crank–Nicolson, and (standard) Parallel Tempering.

Topics & Concepts

Parallel temperingMarkov chain Monte CarloMetropolis–Hastings algorithmMarkov chainLimit (mathematics)Computer scienceAlgorithmSampling (signal processing)Random walkContext (archaeology)Convergence (economics)Bayesian probabilityMathematicsApplied mathematicsMathematical optimizationHybrid Monte CarloArtificial intelligenceMachine learningStatisticsFilter (signal processing)BiologyPaleontologyMathematical analysisEconomic growthComputer visionEconomicsMarkov Chains and Monte Carlo MethodsProtein Structure and DynamicsMass Spectrometry Techniques and Applications
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