Litcius/Paper detail

<i>In situ</i> crystal data-collection and ligand-screening system at SPring-8

Hideo Okumura, Naoki Sakai, Hironori Murakami, Nobuhiro Mizuno, Yuki Nakamura, Go Ueno, Takuya Masunaga, Takashi Kawamura, Seiki Baba, Kazuya Hasegawa, Masaki Yamamoto, Takashi Kumasaka

2022Acta Crystallographica Section F Structural Biology Communications12 citationsDOIOpen Access PDF

Abstract

In situ diffraction data collection using crystallization plates has been utilized for macromolecules to evaluate crystal quality without requiring additional sample treatment such as cryocooling. Although it is difficult to collect complete data sets using this technique due to the mechanical limitation of crystal rotation, recent advances in methods for data collection from multiple crystals have overcome this issue. At SPring-8, an in situ diffraction measurement system was constructed consisting of a goniometer for a plate, an articulated robot and plate storage. Using this system, complete data sets were obtained utilizing the small-wedge measurement method. Combining this system with an acoustic liquid handler to prepare protein-ligand complex crystals by applying fragment compounds to trypsin crystals for in situ soaking, binding was confirmed for seven out of eight compounds. These results show that the system functioned properly to collect complete data for structural analysis and to expand the capability for ligand screening in combination with a liquid dispenser.

Topics & Concepts

In situCrystallizationGoniometerDiffractionMaterials scienceWedge (geometry)CrystallographyLigand (biochemistry)Data collectionSpring (device)Crystal (programming language)Computer scienceChemistryOpticsEngineeringPhysicsMechanical engineeringMathematicsOrganic chemistryStatisticsBiochemistryReceptorProgramming languageEnzyme Structure and FunctionProtein Structure and DynamicsProtein purification and stability