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Comprehensive Analysis of Ferroptosis- and Immune-Related Signatures to Improve the Prognosis and Diagnosis of Kidney Renal Clear Cell Carcinoma

Xiao‐Liang Xing, Yan Liu, Jiheng Liu, Huanfa Zhou, Huirong Zhang, Qi Zuo, Ping Bu, Tong Duan, Yan Zhou, Zhiquan Xiao

2022Frontiers in Immunology23 citationsDOIOpen Access PDF

Abstract

Background: Almost 40% of patients with kidney renal clear cell carcinoma (KIRC) with advanced cancers eventually develop to metastases, and their 5-year survival rates are approximately 10%. Aberrant DNA methylations are significantly associated with the development of KIRC. The aim of our present study was to identify suitable ferroptosis- and immune-related (FI) biomarkers correlated with aberrant methylations to improve the prognosis and diagnosis of KIRC. Methods: ChAMP and DESeq2 in R (3.6.2) were used to screen the differentially expressed methylation probes and differentially expressed genes, respectively. Univariate and multivariate Cox regression were used to identify the overall survival (OS)-related biomarkers. Results: ) that were independently correlated with the OS of KIRC. The area under the curve value of the receiver operating characteristic value of prognosis model was 0.74, 0.68, and 0.72 in the training, validation, and entire cohorts, respectively. The sensitivity and specificity of the diagnosis model were 0.8698 and 0.9722, respectively. In addition, the prognosis model was also significantly correlated with several immune cells and factors. Conclusion: ) could be used as prognosis and diagnosis biomarkers for patients with KIRC, but further cross-validation clinical studies are still needed to confirm them.

Topics & Concepts

Proportional hazards modelDNA methylationReceiver operating characteristicImmune systemOncologyRenal cell carcinomaUnivariateKidney cancerMethylationInternal medicineMedicineBiologyComputational biologyCancer researchMultivariate statisticsGeneImmunologyGeneticsGene expressionMathematicsStatisticsFerroptosis and cancer prognosisRenal cell carcinoma treatmentBladder and Urothelial Cancer Treatments