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Three-Dimensional Single-Molecule Localization Microscopy in Whole-Cell and Tissue Specimens

Sheng Liu, Hyun Huh, Sang-Hyuk Lee, Fang Huang

2020Annual Review of Biomedical Engineering45 citationsDOIOpen Access PDF

Abstract

Super-resolution microscopy techniques are versatile and powerful tools for visualizing organelle structures, interactions, and protein functions in biomedical research. However, whole-cell and tissue specimens challenge the achievable resolution and depth of nanoscopy methods. We focus on three-dimensional single-molecule localization microscopy and review some of the major roadblocks and developing solutions to resolving thick volumes of cells and tissues at the nanoscale in three dimensions. These challenges include background fluorescence, system- and sample-induced aberrations, and information carried by photons, as well as drift correction, volume reconstruction, and photobleaching mitigation. We also highlight examples of innovations that have demonstrated significant breakthroughs in addressing the abovementioned challenges together with their core concepts as well as their trade-offs.

Topics & Concepts

MicroscopyPhotobleachingFluorescence recovery after photobleachingFluorescence microscopeResolution (logic)NanotechnologyFocus (optics)Photoactivated localization microscopyHigh resolutionOrganelleSuper-resolution microscopyNanoscopic scaleComputer scienceBiologyBiophysicsMaterials scienceOpticsFluorescenceCell biologyPhysicsArtificial intelligenceScanning confocal electron microscopyRemote sensingGeologyAdvanced Fluorescence Microscopy TechniquesAdvanced Electron Microscopy Techniques and ApplicationsNear-Field Optical Microscopy
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