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Boosting biodiversity monitoring using smartphone-driven, rapidly accumulating community-sourced data

Keisuke Atsumi, Yuusuke Nishida, Masayuki Ushio, Hirotaka Nishi, Takanori Genroku, Shogoro Fujiki

2024eLife12 citationsDOIOpen Access PDF

Abstract

Comprehensive biodiversity data is crucial for ecosystem protection. The Biome mobile app, launched in Japan, efficiently gathers species observations from the public using species identification algorithms and gamification elements. The app has amassed >6 million observations since 2019. Nonetheless, community-sourced data may exhibit spatial and taxonomic biases. Species distribution models (SDMs) estimate species distribution while accommodating such bias. Here, we investigated the quality of Biome data and its impact on SDM performance. Species identification accuracy exceeds 95% for birds, reptiles, mammals, and amphibians, but seed plants, molluscs, and fishes scored below 90%. Our SDMs for 132 terrestrial plants and animals across Japan revealed that incorporating Biome data into traditional survey data improved accuracy. For endangered species, traditional survey data required >2000 records for accurate models (Boyce index ≥ 0.9), while blending the two data sources reduced this to around 300. The uniform coverage of urban-natural gradients by Biome data, compared to traditional data biased towards natural areas, may explain this improvement. Combining multiple data sources better estimates species distributions, aiding in protected area designation and ecosystem service assessment. Establishing a platform for accumulating community-sourced distribution data will contribute to conserving and monitoring natural ecosystems.

Topics & Concepts

BiodiversityCitizen scienceBoosting (machine learning)Computer scienceEnvironmental resource managementEnvironmental scienceData scienceBiologyEcologyMachine learningBotanySpecies Distribution and Climate ChangeAnimal and Plant Science EducationPlant and animal studies
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