The Leaf Microbiome of <i>Arabidopsis</i> Displays Reproducible Dynamics and Patterns throughout the Growing Season
Juliana Almario, Maryam Mahmoudi, Samuel Kroll, Matthew T. Agler, Aleksandra Placzek, Alfredo Mari, Eric Kemen
Abstract
Utilizing plant microbiota to promote plant growth and plant health is key to more environmentally friendly agriculture. A major bottleneck in the engineering of plant-beneficial microbial communities is the low persistence of applied microbes under filed conditions, especially considering plant leaves. Indeed, although many leaf-associated microorganisms have the potential to promote plant growth and protect plants from pathogens, few of them are able to survive and thrive over time. In our study, we could show that leaf microbial communities are very variable at the beginning of the plant growing season but become more and more similar and less variable as the season progresses. We further identify a cohort of 19 "core" microbes, systematically present on plant leaves that would make these microbes exceptional candidates for future agricultural applications.