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The genome sequence of the brown trout, Salmo trutta Linnaeus 1758

Tom Hansen, Per Gunnar Fjelldal, Sigbjørn Lien, Michelle Smith, Craig Corton, Karen Oliver, Jason Skelton, Emma Betteridge, Jale Doulcan, Olivier Fédrigo, Jacquelyn Mountcastle, Erich D. Jarvis, Shane McCarthy, William Chow, Kerstin Howe, James Torrance, Jonathan Wood, Ying Sims, Leanne Haggerty, Richard Challis, Jonathan Threlfall, Daniel G. Mead, Richard Durbin, Mark Blaxter

2021Wellcome Open Research38 citationsDOIOpen Access PDF

Abstract

<ns3:p> We present a genome assembly from an individual female <ns3:italic>Salmo trutta</ns3:italic> (the brown trout; Chordata; Actinopteri; Salmoniformes; Salmonidae). The genome sequence is 2.37 gigabases in span. The majority of the assembly is scaffolded into 40 chromosomal pseudomolecules. Gene annotation of this assembly on Ensembl has identified 43,935 protein coding genes. </ns3:p>

Topics & Concepts

SalmoBrown troutTroutBiologyFisheryZoologySequence (biology)Fish <Actinopterygii>GeneticsGenomics and Phylogenetic StudiesIdentification and Quantification in FoodAnimal Genetics and Reproduction
The genome sequence of the brown trout, Salmo trutta Linnaeus 1758 | Litcius