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Introducing www.axolotl-omics.org – an integrated -omics data portal for the axolotl research community

Sergej Nowoshilow, Elly M. Tanaka

2020Experimental Cell Research23 citationsDOIOpen Access PDF

Abstract

Genomic resources are indispensable for biological investigations in model organisms. In recent years, a number of genomic resources including a full genome assembly, extensive transcriptomic data, as well as genome editing has been developed for the axolotl, a classical model organism for developmental, neurobiological and regeneration studies, making the axolotl a highly versatile system. Here we describe the Axolotl-omics website that allows rapid ortholog searches, and access to genome and transcriptomic resources.

Topics & Concepts

AxolotlBiologyOmicsGenomeModel organismComputational biologyTranscriptomeAmbystoma mexicanumGenomicsRegeneration (biology)GeneticsGeneGene expressionSingle-cell and spatial transcriptomicsBioinformatics and Genomic NetworksGenomics and Phylogenetic Studies