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Development and evaluation of a rapid CRISPR-based diagnostic for COVID-19

Tieying Hou, Weiqi Zeng, Minling Yang, Wenjing Chen, Lili Ren, Jingwen Ai, Ji Wu, Yalong Liao, Xuejing Gou, Yongjun Li, Xiaorui Wang, Hang Su, Bing Gu, Jianwei Wang, Teng Xu

2020PLoS Pathogens209 citationsDOIOpen Access PDF

Abstract

The recent outbreak of human infections caused by SARS-CoV-2, the third zoonotic coronavirus has raised great public health concern globally. Rapid and accurate diagnosis of this novel pathogen posts great challenges not only clinically but also technologically. Metagenomic next-generation sequencing (mNGS) and reverse-transcription PCR (RT-PCR) have been the most commonly used molecular methodologies. However, each has their own limitations. In this study, we developed an isothermal, CRISPR-based diagnostic for COVID-19 with near single-copy sensitivity. The diagnostic performances of all three technology platforms were also compared. Our study aimed to provide more insights into the molecular detection of SARS-CoV-2, and also to present a novel diagnostic option for this new emerging virus.

Topics & Concepts

CRISPRCoronavirus disease 2019 (COVID-19)Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)MetagenomicsComputational biologyOutbreakLoop-mediated isothermal amplification2019-20 coronavirus outbreakBiologyVirologyMolecular diagnosticsDNA sequencingInfectious disease (medical specialty)BioinformaticsMedicineGeneticsDNAGeneDiseasePathologyCRISPR and Genetic EngineeringSARS-CoV-2 and COVID-19 ResearchMosquito-borne diseases and control
Development and evaluation of a rapid CRISPR-based diagnostic for COVID-19 | Litcius