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Single-cell measurement of plasmid copy number and promoter activity

Bin Shao, Jayan Rammohan, Daniel A. Anderson, Nina Alperovich, David Ross, Christopher A. Voigt

2021Nature Communications107 citationsDOIOpen Access PDF

Abstract

Accurate measurements of promoter activities are crucial for predictably building genetic systems. Here we report a method to simultaneously count plasmid DNA, RNA transcripts, and protein expression in single living bacteria. From these data, the activity of a promoter in units of RNAP/s can be inferred. This work facilitates the reporting of promoters in absolute units, the variability in their activity across a population, and their quantitative toll on cellular resources, all of which provide critical insights for cellular engineering.

Topics & Concepts

PlasmidPromoter activityPromoterBiologyComputational biologyDNAGeneticsRNAPopulationGeneGene expressionDemographySociologyBacterial Genetics and BiotechnologyGene Regulatory Network AnalysisCRISPR and Genetic Engineering
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