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Outbreak.info genomic reports: scalable and dynamic surveillance of SARS-CoV-2 variants and mutations

Karthik Gangavarapu, Alaa Abdel Latif, Julia L. Mullen, Manar Alkuzweny, Emory Hufbauer, Ginger Tsueng, Emily Haag, Mark Zeller, Christine M. Aceves, Karina Zaiets, Marco Alvarado Cano, Xinghua Zhou, Zhongchao Qian, Rachel Sattler, Nathaniel L. Matteson, Joshua I. Levy, Raphael Tze Chuen Lee, Lucas Freitas, Sebastian Maurer‐Stroh, GISAID Core and Curation Team, Marc A. Suchard, Chunlei Wu, Andrew I. Su, Kristian G. Andersen, Laura D. Hughes

2023Nature Methods378 citationsDOIOpen Access PDF

Topics & Concepts

OutbreakSevere acute respiratory syndrome coronavirus 2 (SARS-CoV-2)VirologyCoronavirus disease 2019 (COVID-19)Biology2019-20 coronavirus outbreakComputational biologyMutationGeneticsMedicineGeneInfectious disease (medical specialty)DiseasePathologySARS-CoV-2 and COVID-19 ResearchSARS-CoV-2 detection and testingViral Infections and Outbreaks Research
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