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Electrode pooling can boost the yield of extracellular recordings with switchable silicon probes

Kyu Hyun Lee, Yu‐Li Ni, Jennifer Colonell, Bill Karsh, Jan Putzeys, Marius Pachitariu, T.D. Harris, Markus Meister

2021Nature Communications12 citationsDOIOpen Access PDF

Abstract

State-of-the-art silicon probes for electrical recording from neurons have thousands of recording sites. However, due to volume limitations there are typically many fewer wires carrying signals off the probe, which restricts the number of channels that can be recorded simultaneously. To overcome this fundamental constraint, we propose a method called electrode pooling that uses a single wire to serve many recording sites through a set of controllable switches. Here we present the framework behind this method and an experimental strategy to support it. We then demonstrate its feasibility by implementing electrode pooling on the Neuropixels 1.0 electrode array and characterizing its effect on signal and noise. Finally we use simulations to explore the conditions under which electrode pooling saves wires without compromising the content of the recordings. We make recommendations on the design of future devices to take advantage of this strategy.

Topics & Concepts

PoolingElectrodeComputer scienceConstraint (computer-aided design)Noise (video)Set (abstract data type)SiliconMaterials scienceSIGNAL (programming language)OptoelectronicsNanotechnologyArtificial intelligenceChemistryEngineeringMechanical engineeringProgramming languageImage (mathematics)Physical chemistryNeuroscience and Neural EngineeringAdvanced Memory and Neural ComputingNeural dynamics and brain function