Decrypting Integrins by Mixed-Solvent Molecular Dynamics Simulations
Ioana M. Ilie, Claus Ehrhardt, Amedeo Caflisch, Gabriele Weitz‐Schmidt
Abstract
High Resolution Image Download MS PowerPoint Slide Integrins are a family of α/β heterodimeric cell surface adhesion receptors which are capable of transmitting signals bidirectionally across membranes. They are known for their therapeutic potential in a wide range of diseases. However, the development of integrin-targeting medications has been impacted by unexpected downstream effects including unwanted agonist-like effects. Allosteric modulation of integrins is a promising approach to potentially overcome these limitations. Applying mixed-solvent molecular dynamics (MD) simulations to integrins, the current study uncovers hitherto unknown allosteric sites within the integrin α I domains of LFA-1 (α L β 2; CD11a/CD18), VLA-1 (α 1 β 1; CD49a/CD29), and Mac-1 (α M β 2, CD11b/CD18). We show that these pockets are putatively accessible to small-molecule modulators. The findings reported here may provide opportunities for the design of novel allosteric integrin inhibitors lacking the unwanted agonism observed with earlier as well as current integrin-targeting drugs.