Litcius/Paper detail

Spatial omics technologies at multimodal and single cell/subcellular level

Jiwoon Park, Junbum Kim, Tyler Lewy, Charles M. Rice, Olivier Elemento, André F. Rendeiro, Christopher E. Mason

2022Genome biology116 citationsDOIOpen Access PDF

Abstract

Spatial omics technologies enable a deeper understanding of cellular organizations and interactions within a tissue of interest. These assays can identify specific compartments or regions in a tissue with differential transcript or protein abundance, delineate their interactions, and complement other methods in defining cellular phenotypes. A variety of spatial methodologies are being developed and commercialized; however, these techniques differ in spatial resolution, multiplexing capability, scale/throughput, and coverage. Here, we review the current and prospective landscape of single cell to subcellular resolution spatial omics technologies and analysis tools to provide a comprehensive picture for both research and clinical applications.

Topics & Concepts

BiologyComputational biologyOmicsSystems biologyData scienceBioinformaticsComputer scienceSingle-cell and spatial transcriptomicsCell Image Analysis TechniquesGene Regulatory Network Analysis