A sampling strategy for genome sequencing the British terrestrial arthropod fauna
Liam M Crowley, Heather Allen, Ian Barnes, Douglas Boyes, Gavin R. Broad, Chris Fletcher, Peter W. H. Holland, Inez Januszczak, Mara Lawniczak, Owen T. Lewis, Craig R. Macadam, Peter O. Mulhair, Lyndall Pereira da Conceicoa, Benjamin Price, Chris Raper, Olga Sivell, Laura Sivess
Abstract
The Darwin Tree of Life (DToL) project aims to sequence and assemble high-quality genomes from all eukaryote species in Britain and Ireland, with the first phase of the project concentrating on family-level coverage plus species of particular ecological, biomedical or evolutionary interest. We summarise the processes involved in (1) assessing the UK arthropod fauna and the status of individual species on UK lists; (2) prioritising and collecting species for initial genome sequencing; (3) handling methods to ensure that high-quality genomic DNA is preserved; and (4) compiling standard operating procedures for processing specimens for genome sequencing, identification verification and voucher specimen curation. We briefly explore some lessons learned from the pilot phase of DToL and the impact of the Covid-19 pandemic.