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Seryl-tRNA synthetase promotes translational readthrough by mRNA binding and involvement of the selenocysteine incorporation machinery

Ze Liu, Justin Wang, Yi Shi, Brian A. Yee, Markus Terrey, Qian Zhang, Jenq‐Chang Lee, Kuo‐I Lin, Andrew H.‐J. Wang, Susan L. Ackerman, G Yeo, Haissi Cui, Xiang‐Lei Yang

2023Nucleic Acids Research16 citationsDOIOpen Access PDF

Abstract

Translational readthrough of UGA stop codons by selenocysteine-specific tRNA (tRNASec) enables the synthesis of selenoproteins. Seryl-tRNA synthetase (SerRS) charges tRNASec with serine, which is modified into selenocysteine and delivered to the ribosome by a designated elongation factor (eEFSec in eukaryotes). Here we found that components of the human selenocysteine incorporation machinery (SerRS, tRNASec, and eEFSec) also increased translational readthrough of non-selenocysteine genes, including VEGFA, to create C-terminally extended isoforms. SerRS recognizes target mRNAs through a stem-loop structure that resembles the variable loop of its cognate tRNAs. This function of SerRS depends on both its enzymatic activity and a vertebrate-specific domain. Through eCLIP-seq, we identified additional SerRS-interacting mRNAs as potential readthrough genes. Moreover, SerRS overexpression was sufficient to reverse premature termination caused by a pathogenic nonsense mutation. Our findings expand the repertoire of selenoprotein biosynthesis machinery and suggest an avenue for therapeutic targeting of nonsense mutations using endogenous factors.

Topics & Concepts

SelenocysteineBiologyTransfer RNASelenoproteinStop codonBiochemistryGeneticsTranslation (biology)GeneNonsense mutationMessenger RNARNAMutationEnzymeCysteineGlutathioneGlutathione peroxidaseMissense mutationRNA modifications and cancerRNA and protein synthesis mechanismsRNA Research and Splicing