Migrating CUDA to oneAPI: A Smith-Waterman Case Study
Manuel Costanzo, Enzo Rucci, Carlos García, Marcelo Naiouf, Manuel Prieto
Topics & Concepts
CUDASoftware portabilityComputer sciencePortingParallel computingSmith–Waterman algorithmCode (set theory)General-purpose computing on graphics processing unitsSoftwareComputer architectureOperating systemProgramming languageSequence alignmentGraphicsChemistryBiochemistryGeneSet (abstract data type)Peptide sequenceAlgorithms and Data CompressionGenomics and Phylogenetic StudiesEvolutionary Algorithms and Applications