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In-Depth Analysis of Graph-Based RAG in a Unified Framework

Yingli Zhou, YaoDong Su, Youran Sun, Shu Lan Wang, Taotao Wang, Rongxin He, Yongwei Zhang, Sicong Liang, Xilin Liu, Yuchi Ma, Yixiang Fang

2025Proceedings of the VLDB Endowment10 citationsDOI

Abstract

Graph-based Retrieval-Augmented Generation (RAG) has proven effective in integrating external knowledge into large language models (LLMs), improving their factual accuracy, adaptability, interpretability, and trustworthiness. A number of graph-based RAG methods have been proposed in the literature. However, these methods have not been systematically and comprehensively compared under the same experimental settings. In this paper, we first summarize a unified framework to incorporate all graph-based RAG methods from a high-level perspective. We then extensively compare representative graph-based RAG methods over a range of questing-answering (QA) datasets - from specific questions to abstract questions - and examine the effectiveness of all methods, providing a thorough analysis of graph-based RAG approaches. As a byproduct of our experimental analysis, we are also able to identify new variants of the graph-based RAG methods over specific QA and abstract QA tasks respectively, by combining existing techniques, which outperform the state-of-the-art methods. Finally, based on these findings, we offer promising research opportunities. We believe that a deeper understanding of the behavior of existing methods can provide new valuable insights for future research.

Topics & Concepts

Computer scienceArtificial intelligenceRange (aeronautics)Key (lock)Language modelMachine learningData scienceFocus (optics)Natural languageVariety (cybernetics)Topic ModelingMultimodal Machine Learning ApplicationsAdvanced Graph Neural Networks
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