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Advanced Methods for Natural Products Discovery: Bioactivity Screening, Dereplication, Metabolomics Profiling, Genomic Sequencing, Databases and Informatic Tools, and Structure Elucidation

Susana P. Gaudêncio, Engin Bayram, Lada Lukić‐Bilela, Mercedes Cueto, Ana R. Díaz‐Marrero, Berat Z. Haznedaroğlu, Carlos Jiménez, Manolis Mandalakis, Florbela Pereira, Fernando Reyes, Deniz Taşdemir

2023Marine Drugs149 citationsDOIOpen Access PDF

Abstract

Natural Products (NP) are essential for the discovery of novel drugs and products for numerous biotechnological applications. The NP discovery process is expensive and time-consuming, having as major hurdles dereplication (early identification of known compounds) and structure elucidation, particularly the determination of the absolute configuration of metabolites with stereogenic centers. This review comprehensively focuses on recent technological and instrumental advances, highlighting the development of methods that alleviate these obstacles, paving the way for accelerating NP discovery towards biotechnological applications. Herein, we emphasize the most innovative high-throughput tools and methods for advancing bioactivity screening, NP chemical analysis, dereplication, metabolite profiling, metabolomics, genome sequencing and/or genomics approaches, databases, bioinformatics, chemoinformatics, and three-dimensional NP structure elucidation.

Topics & Concepts

Metabolite profilingDrug discoveryComputational biologyCheminformaticsProfiling (computer programming)MetabolomicsGenomicsIdentification (biology)BiologyComputer scienceGenomeBioinformaticsGeneticsGeneBotanyOperating systemMicrobial Natural Products and BiosynthesisMetabolomics and Mass Spectrometry StudiesChromatography in Natural Products
Advanced Methods for Natural Products Discovery: Bioactivity Screening, Dereplication, Metabolomics Profiling, Genomic Sequencing, Databases and Informatic Tools, and Structure Elucidation | Litcius