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Single-cell multi-omics and lineage tracing to dissect cell fate decision-making

Laleh Haghverdi, Leif S. Ludwig

2023Stem Cell Reports35 citationsDOIOpen Access PDF

Abstract

The concept of cell fate relates to the future identity of a cell, and its daughters, which is obtained via cell differentiation and division. Understanding, predicting, and manipulating cell fate has been a long-sought goal of developmental and regenerative biology. Recent insights obtained from single-cell genomic and integrative lineage-tracing approaches have further aided to identify molecular features predictive of cell fate. In this perspective, we discuss these approaches with a focus on theoretical concepts and future directions of the field to dissect molecular mechanisms underlying cell fate.

Topics & Concepts

BiologyCell fate determinationComputational biologyTracingCell lineageLineage (genetic)CellEvolutionary biologyCell biologyCellular differentiationGeneticsGeneTranscription factorComputer scienceOperating systemSingle-cell and spatial transcriptomicsGene Regulatory Network AnalysisCancer Genomics and Diagnostics
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