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Genome Sequences of Six SARS-CoV-2 Strains Isolated in Morocco, Obtained Using Oxford Nanopore MinION Technology

Meriem Laamarti, Mohammed Walid Chemao-Elfihri, Souad Kartti, Rokia Laamarti, Loubna Allam, Mouna Ouadghiri, Imane Smyej, Jalila Rahoui, Houda Benrahma, Idrissa Diawara, Tarek Alouane, Abdelmounim Essabbar, Samir Siah, Mohammed Karra, Naïma El Hafidi, Rachid El Jaoudi, Laïla Sbabou, Chakib Nejjari, Saaïd Amzazi, Rachid Mentag, Lahcen Belyamani, Azeddine Ibrahimi

2020Microbiology Resource Announcements18 citationsDOIOpen Access PDF

Abstract

Here, we report the draft genome sequences of six severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) strains. SARS-CoV-2 is responsible for the COVID-19 pandemic, which started at the end of 2019 in Wuhan, China. The isolates were obtained from nasopharyngeal swabs from Moroccan patients with COVID-19. Mutation analysis revealed the presence of the spike D614G mutation in all six genomes, which is widely present in several genomes around the world.

Topics & Concepts

MinionGenomeSevere acute respiratory syndrome coronavirus 2 (SARS-CoV-2)Coronavirus disease 2019 (COVID-19)PandemicVirologyNanopore sequencingBiology2019-20 coronavirus outbreakMutationCoronavirusGeneticsGeneMedicineOutbreakInfectious disease (medical specialty)DiseasePathologyBacteriophages and microbial interactionsSARS-CoV-2 and COVID-19 ResearchMicrobial infections and disease research