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trim-21 promotes proteasomal degradation of CED-1 for apoptotic cell clearance in C. elegans

Lei Yuan, Peiyao Li, Huiru Jing, Qian Zheng, Hui Xiao

2022eLife15 citationsDOIOpen Access PDF

Abstract

The phagocytic receptor CED-1 mediates apoptotic cell recognition by phagocytic cells, enabling cell corpse clearance in Caenorhabditis elegans . Whether appropriate levels of CED-1 are maintained for executing the engulfment function remains unknown. Here, we identified the C. elegans E3 ubiquitin ligase tripartite motif containing-21 (TRIM-21) as a component of the CED-1 pathway for apoptotic cell clearance. When the NPXY motif of CED-1 was bound to the adaptor protein CED-6 or the YXXL motif of CED-1 was phosphorylated by tyrosine kinase SRC-1 and subsequently bound to the adaptor protein NCK-1 containing the SH2 domain, TRIM-21 functioned in conjunction with UBC-21 to catalyze K48-linked poly-ubiquitination on CED-1, targeting it for proteasomal degradation. In the absence of TRIM-21, CED-1 accumulated post-translationally and drove cell corpse degradation defects, as evidenced by direct binding to VHA-10. These findings reveal a unique mechanism for the maintenance of appropriate levels of CED-1 to regulate apoptotic cell clearance.

Topics & Concepts

Signal transducing adaptor proteinCell biologyUbiquitin ligaseUbiquitinProto-oncogene tyrosine-protein kinase SrcCaenorhabditis elegansProteasomeCellApoptosisPhosphorylationChemistryTyrosine kinasePhosphotyrosine-binding domainBiologySignal transductionSH2 domainBiochemistryGenePhagocytosis and Immune RegulationGenetics, Aging, and Longevity in Model OrganismsNanoparticles: synthesis and applications
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