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Efficient biosynthesis of nucleoside cytokinin angustmycin A containing an unusual sugar system

Le Yu, Wenting Zhou, Yixuan She, Hongmin Ma, You‐Sheng Cai, Ming Jiang, Zixin Deng, Neil P. J. Price, Wenqing Chen

2021Nature Communications27 citationsDOIOpen Access PDF

Abstract

Angustmycin A has anti-mycobacterial and cytokinin activities, and contains an intriguing structure in which an unusual sugar with C5'-C6' dehydration is linked to adenine via an N-glycosidic bond. However, the logic underlying the biosynthesis of this molecule has long remained obscure. Here, we address angustmycin A biosynthesis by the full deciphering of its pathway. We demonstrate that AgmD, C, A, E, and B function as D-allulose 6-phosphate 3-epimerase, D-allulose 6-phosphate pyrophosphokinase, adenine phosphoallulosyltransferase, phosphoribohydrolase, and phosphatase, respectively, and that these collaboratively catalyze the relay reactions to biosynthesize angustmycin C. Additionally, we provide evidence that AgmF is a noncanonical dehydratase for the final step to angustmycin A via a self-sufficient strategy for cofactor recycling. Finally, we have reconstituted the entire six-enzyme pathway in vitro and in E. coli leading to angustmycin A production. These results expand the enzymatic repertoire regarding natural product biosynthesis, and also open the way for rational and rapid discovery of other angustmycin related antibiotics.

Topics & Concepts

BiosynthesisBiochemistryDehydrataseEnzymeTransferaseChemistryCytokininNatural productSugar phosphatesSugarNucleotideBiologyStereochemistryGeneAuxinBiochemical and Molecular ResearchCarbohydrate Chemistry and SynthesisEnzyme Structure and Function