Meta-analysis of single-cell and single-nucleus transcriptomics reveals kidney cell type consensus signatures
Marceau Quatredeniers, Alice Serafin, Alexandre Benmerah, Antonio Rausell, Sophie Saunier, Amandine Viau
Abstract
While the amount of studies involving single-cell or single-nucleus RNA-sequencing technologies grows exponentially within the biomedical research area, the kidney field requires reference transcriptomic signatures to allocate each cluster its matching cell type. The present meta-analysis of 39 previously published datasets, from 7 independent studies, involving healthy human adult kidney samples, offers a set of 24 distinct consensus kidney cell type signatures. The use of these signatures may help to assure the reliability of cell type identification in future studies involving single-cell and single-nucleus transcriptomics while improving the reproducibility in cell type allocation.