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Cryo-EM structures reveal intricate Fe-S cluster arrangement and charging in Rhodobacter capsulatus formate dehydrogenase

Christin Radon, Gerd Mittelstädt, Benjamin R. Duffus, Jörg Bürger, Tobias Hartmann, Thorsten Mielke, Christian Teutloff, Silke Leimkühler, Petra Wendler

2020Nature Communications90 citationsDOIOpen Access PDF

Abstract

Metal-containing formate dehydrogenases (FDH) catalyse the reversible oxidation of formate to carbon dioxide at their molybdenum or tungsten active site. They display a diverse subunit and cofactor composition, but structural information on these enzymes is limited. Here we report the cryo-electron microscopic structures of the soluble Rhodobacter capsulatus FDH (RcFDH) as isolated and in the presence of reduced nicotinamide adenine dinucleotide (NADH). RcFDH assembles into a 360 kDa dimer of heterotetramers revealing a putative interconnection of electron pathway chains. In the presence of NADH, the RcFDH structure shows charging of cofactors, indicative of an increased electron load.

Topics & Concepts

RhodobacterCluster (spacecraft)Formate dehydrogenaseFormateChemistryPhysicsCrystallographyMaterials scienceNanotechnologyBiochemistryComputer scienceGeneMutantProgramming languageCatalysisMetalloenzymes and iron-sulfur proteinsEnzyme Structure and FunctionMicrobial Fuel Cells and Bioremediation