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Polymer Translocation and Nanopore Sequencing: A Review of Advances and Challenges

Swarn Lata Singh, Keerti Chauhan, Atul S. Bharadwaj, Vimal Kishore, Peter Laux, Andreas Luch, Ajay Vikram Singh

2023International Journal of Molecular Sciences25 citationsDOIOpen Access PDF

Abstract

Various biological processes involve the translocation of macromolecules across nanopores; these pores are basically protein channels embedded in membranes. Understanding the mechanism of translocation is crucial to a range of technological applications, including DNA sequencing, single molecule detection, and controlled drug delivery. In this spirit, numerous efforts have been made to develop polymer translocation-based sequencing devices, these efforts include findings and insights from theoretical modeling, simulations, and experimental studies. As much as the past and ongoing studies have added to the knowledge, the practical realization of low-cost, high-throughput sequencing devices, however, has still not been realized. There are challenges, the foremost of which is controlling the speed of translocation at the single monomer level, which remain to be addressed in order to use polymer translocation-based methods for sensing applications. In this article, we review the recent studies aimed at developing control over the dynamics of polymer translocation through nanopores.

Topics & Concepts

NanoporeNanotechnologyNanopore sequencingChromosomal translocationPolymerMechanism (biology)Computational biologyComputer scienceDNA sequencingMaterials scienceChemistryDNABiologyPhysicsGeneComposite materialBiochemistryQuantum mechanicsNanopore and Nanochannel Transport StudiesFuel Cells and Related MaterialsRNA Interference and Gene Delivery
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