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Transferable Neural Network Potential Energy Surfaces for Closed-Shell Organic Molecules: Extension to Ions

Leif D. Jacobson, James Stevenson, Farhad Ramezanghorbani, Delaram Ghoreishi, Karl Leswing, Edward Harder, Robert Abel

2022Journal of Chemical Theory and Computation56 citationsDOI

Abstract

Transferable high dimensional neural network potentials (HDNNPs) have shown great promise as an avenue to increase the accuracy and domain of applicability of existing atomistic force fields for organic systems relevant to life science. We have previously reported such a potential (Schrödinger-ANI) that has broad coverage of druglike molecules. We extend that work here to cover ionic and zwitterionic druglike molecules expected to be relevant to drug discovery research activities. We report a novel HDNNP architecture, which we call QRNN, that predicts atomic charges and uses these charges as descriptors in an energy model that delivers conformational energies within chemical accuracy when measured against the reference theory it is trained to. Further, we find that delta learning based on a semiempirical level of theory approximately halves the errors. We test the models on torsion energy profiles, relative conformational energies, geometric parameters, and relative tautomer errors.

Topics & Concepts

Potential energyMoleculeComputer scienceArtificial neural networkIonOrganic moleculesIonic bondingTorsion (gastropod)Work (physics)Chemical physicsBiological systemChemistryPhysicsArtificial intelligenceAtomic physicsQuantum mechanicsSurgeryBiologyMedicineMachine Learning in Materials ScienceComputational Drug Discovery MethodsProtein Structure and Dynamics
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