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Recommendations and Best Practices for Standardizing the Pre-Analytical Processing of Blood and Urine Samples in Metabolomics

Raúl González‐Domínguez, Álvaro González‐Domínguez, Ana Sayago, Ángeles Fernández‐Recamales

2020Metabolites180 citationsDOIOpen Access PDF

Abstract

Metabolomics can be significantly influenced by a range of pre-analytical factors, such as sample collection, pre-processing, aliquoting, transport, storage and thawing. This therefore shows the crucial need for standardizing the pre-analytical phase with the aim of minimizing the inter-sample variability driven by these technical issues, as well as for maintaining the metabolic integrity of biological samples to ensure that metabolomic profiles are a direct expression of the in vivo biochemical status. This review article provides an updated literature revision of the most important factors related to sample handling and pre-processing that may affect metabolomics results, particularly focusing on the most commonly investigated biofluids in metabolomics, namely blood plasma/serum and urine. Finally, we also provide some general recommendations and best practices aimed to standardize and accurately report all these pre-analytical aspects in metabolomics research.

Topics & Concepts

MetabolomicsSample (material)UrineComputer scienceComputational biologyMedicineBioinformaticsBiologyChemistryChromatographyInternal medicineMetabolomics and Mass Spectrometry StudiesIsotope Analysis in EcologyTraditional Chinese Medicine Studies