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Advances in the application of CRISPR-Cas technology in rapid detection of pathogen nucleic acid

Xiaoping Li, Jiaye Zhong, Haoyu Li, Yinbiao Qiao, Xiaolei Mao, Huayan Fan, Yiwu Zhong, Saber İmani, Shusen Zheng, Jianhui Li

2023Frontiers in Molecular Biosciences31 citationsDOIOpen Access PDF

Abstract

(Cas) are widely used as gene editing tools in biology, microbiology, and other fields. CRISPR is composed of highly conserved repetitive sequences and spacer sequences in tandem. The spacer sequence has homology with foreign nucleic acids such as viruses and plasmids; Cas effector proteins have endonucleases, and become a hotspot in the field of molecular diagnosis because they recognize and cut specific DNA or RNA sequences. Researchers have developed many diagnostic platforms with high sensitivity, high specificity, and low cost by using Cas proteins (Cas9, Cas12, Cas13, Cas14, etc.) in combination with signal amplification and transformation technologies (fluorescence method, lateral flow technology, etc.), providing a new way for rapid detection of pathogen nucleic acid. This paper introduces the biological mechanism and classification of CRISPR-Cas technology, summarizes the existing rapid detection technology for pathogen nucleic acid based on the trans cleavage activity of Cas, describes its characteristics, functions, and application scenarios, and prospects the future application of this technology.

Topics & Concepts

CRISPRNucleic acidComputational biologyBiologyGenome editingPlasmidRolling circle replicationDNACas9Nucleic acid detectionGeneGeneticsPolymeraseCRISPR and Genetic EngineeringViral Infections and Immunology ResearchRNA and protein synthesis mechanisms