Designing synthetic regulatory elements using the generative AI framework DNA-Diffusion
Lucas F. daSilva, Simon Senan, Judith F. Kribelbauer, Z. Patel, Lithin Karmel Louis, Aniketh Janardhan Reddy, Sameer Gabbita, Jonathan D. Rosen, Zach Nussbaum, Cesar Miguel Valdez Cordova, Aaron Wenteler, Noah Weber, Tin M. Tunjic, Martino Mansoldo, Talha Ahmad Khan, Gue‐Ho Hwang, Vincent Gardeux, David T. Humphreys, Cameron Smith, Matei Bejan, Peter Bromley, Will Connell, Bart Deplancke, Michael I. Love, Emily S. Wong, Wouter Meuleman, Luca Pinello
Topics & Concepts
Generative grammarBiologyComputational biologySynthetic biologyGenomicsRegulatory sequenceComputational genomicsComputer scienceFunctional genomicsArtificial intelligenceGene regulatory networkGeneRegulation of gene expressionCis-regulatory moduleTranscription factorGenerative modelMachine learningSequence (biology)GenomeTranscription (linguistics)DNA sequencingGrammarGenome engineeringGene expressionEndogenyDNADNA binding siteGenomics and Chromatin DynamicsGene Regulatory Network AnalysisRNA and protein synthesis mechanisms