Litcius/Paper detail

Do-It-Yourself 5-Color 3D Printing of Molecular Orbitals and Electron Density Surfaces

Michelle Garcia, Frances A. O’Leary, Daniel J. O’Leary

2023Journal of Chemical Education11 citationsDOIOpen Access PDF

Abstract

High Resolution Image Download MS PowerPoint Slide This report outlines an approach for preparing 5-color 3D printed plastic models of molecular orbitals and electron density surfaces using a hobby-grade 3D printer. Instructions are provided for preparing 3D orbital and electron density surface (EDS) models using solid or mesh representations in ground state and transition state structures. We show that the information content of 3D orbital and surface models can be enhanced with text annotation, bisection, strut and dashed bond placement, and composite orbital-EDS model constructions. Example prints illustrate orbital concepts in organic and inorganic chemistry, such as the ethyl cation (σ–p hyperconjugation), methane (hybridization and C–H bonding), ethane (σ–σ* hyperconjugation in the staggered and eclipsed conformations), 2-hydroxytetrahydropyran (the anomeric effect/n−σ* hyperconjugation), the water dimer (hydrogen bonding/n−σ* overlap), ethylene, 1,3-butadiene, and benzene (π molecular orbitals), Re 2 Cl 8 2–, and U 2 (COT) 2 (metal–metal quadruple bonds). Transition state models illustrate orbital interactions in the S N 2 reaction of cyanide with methyl, ethyl, and isopropyl chloride and in a hydroboration reaction of BH 3 with propene. Composite EDS models of methyl and isopropyl chloride (for exploring their relative reactivities as S N 2 electrophiles) and methylcyclohexane (visualizing 1,3-diaxial interactions) are described. Student perceptions of a multicolor 3D orbital print used in an introductory organic chemistry laboratory course are reported.

Topics & Concepts

ChemistryHyperconjugationMolecular orbitalComputational chemistryOrbital hybridisationNon-bonding orbitalMolecular orbital diagramMolecular orbital theoryChemical physicsCrystallographyPhysical chemistryOrganic chemistryMoleculeVarious Chemistry Research TopicsChemistry and Chemical EngineeringMachine Learning in Materials Science