Manually curated and harmonised transcriptomics datasets of psoriasis and atopic dermatitis patients
Antonio Federico, Veera Hautanen, Nils Christian, Andreas Kremer, Angela Serra, Dario Greco
Abstract
We present manually curated transcriptomics data of psoriasis and atopic dermatitis patients retrieved from the NCBI Gene Expression Omnibus and EBI ArrayExpress repositories. We collected 39 transcriptomics datasets, deriving from DNA microarrays and RNA-Sequencing technologies, for a total of 1677 samples. We provide quality-checked, homogenised and preprocessed gene expression matrices and their corresponding metadata tables along with the estimated surrogate variables. These data represent a ready-made valuable source of knowledge for translational researchers in the dermatology field.
Topics & Concepts
Atopic dermatitisPsoriasisMetadataTranscriptomeDNA microarrayComputational biologyBioinformaticsComputer scienceBiologyGene expressionGeneMedicineDermatologyWorld Wide WebGeneticsDermatology and Skin DiseasesBioinformatics and Genomic NetworksAnimal Disease Management and Epidemiology