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Graph convolutional network based optic disc and cup segmentation on fundus images

Zhiqiang Tian, Yaoyue Zheng, Xiaojian Li, Shaoyi Du, Xiayu Xu

2020Biomedical Optics Express24 citationsDOIOpen Access PDF

Abstract

Calculating the cup-to-disc ratio is one of the methods for glaucoma screening with other clinical features. In this paper, we propose a graph convolutional network (GCN) based method to implement the optic disc (OD) and optic cup (OC) segmentation task. We first present a multi-scale convolutional neural network (CNN) as the feature map extractor to generate feature map. The GCN takes the feature map concatenated with the graph nodes as the input for segmentation task. The experimental results on the REFUGE dataset show that the Jaccard index (Jacc) of the proposed method on OD and OC are 95.64% and 91.60%, respectively, while the Dice similarity coefficients (DSC) are 97.76% and 95.58%, respectively. The proposed method outperforms the state-of-the-art methods on the REFUGE leaderboard. We also evaluate the proposed method on the Drishthi-GS1 dataset. The results show that the proposed method outperforms the state-of-the-art methods.

Topics & Concepts

Jaccard indexOptic cup (embryology)Computer scienceArtificial intelligencePattern recognition (psychology)Convolutional neural networkSegmentationGraphFeature (linguistics)Feature extractionOptic discExtractorGlaucomaOphthalmologyPhenotypeEngineeringEye developmentBiochemistryProcess engineeringMedicineGeneChemistryPhilosophyLinguisticsTheoretical computer scienceRetinal Imaging and AnalysisGlaucoma and retinal disordersDigital Imaging for Blood Diseases
Graph convolutional network based optic disc and cup segmentation on fundus images | Litcius