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Substrate Dynamics Contribute to Enzymatic Specificity in Human and Bacterial Methionine Adenosyltransferases

Madhuri Gade, Li Lynn Tan, Adam M. Damry, Mahakaran Sandhu, Joseph Brock, Andie R. Delaney, Alejandro Villar‐Briones, Colin J. Jackson, Paola Laurino

2021JACS Au22 citationsDOIOpen Access PDF

Abstract

(eMAT) methionine adenosyltransferases that have identical active sites but different substrate specificity. In the promiscuous hMAT2A, noncognate substrates bind in a stable conformation to allow catalysis. In contrast, noncognate substrates sample stable productive binding modes less frequently in eMAT owing to altered mobility in the enzyme active site. Different cellular concentrations of substrates likely drove the evolutionary divergence of substrate specificity in these orthologues. The observation of catalytic promiscuity in hMAT2A led to the detection of a new human metabolite, methyl thioguanosine, that is produced at elevated levels in a cancer cell line. This work establishes that identical active sites can result in different substrate specificity owing to the effects of substrate and enzyme dynamics.

Topics & Concepts

Substrate (aquarium)EnzymeBiochemistryActive siteChemistryProtein dynamicsBiophysicsBiologyStereochemistryProtein structureEcologyFolate and B Vitamins ResearchBiochemical and Molecular ResearchRNA modifications and cancer