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A genome‐wide association study revealed five SNPs affecting 8‐month weight in sheep

Majid Pasandideh, Mohsen Gholizadeh, Ghodratollah Rahimi‐Mianji

2020Animal Genetics34 citationsDOI

Abstract

Lamb weight at 8 months of age is an important trait in the sheep industry in terms of the onset of puberty around this age; however, knowledge of its effective genetic factors is limited. Therefore, a GWAS using the 50K SNP-Chip was performed on 96 Baluchi sheep to identify the genomic regions associated with 8-month weight. The results of the present study revealed five SNPs on chromosomes 4, 14 and 16 at 5% chromosome-wide significance level, jointly accounting for 0.95% of total genetic variance. Four genes - MTPN, HYDIN, LRGUK and ZFP90 - were found in 50 kb intervals around the significant SNPs, of which MTPN is involved in regulation of skeletal muscle growth. Our results may provide a new vision to identify the genomic regions affecting growth traits in sheep.

Topics & Concepts

BiologyGenome-wide association studySingle-nucleotide polymorphismSNPQuantitative trait locusGeneticsGenetic associationTraitChromosomeGeneGenotypeProgramming languageComputer scienceGenetic and phenotypic traits in livestockGenetic Mapping and Diversity in Plants and AnimalsCancer-related molecular mechanisms research
A genome‐wide association study revealed five SNPs affecting 8‐month weight in sheep | Litcius