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Metabolic engineering of Halomonas campaniensis strain XH26 to remove competing pathways to enhance ectoine production

Zhiwan Shu, Xin Zhang, Rong Wang, Jiangwa Xing, Yongzhen Li, Derui Zhu, Guo‐Ping Shen

2023Scientific Reports13 citationsDOIOpen Access PDF

Abstract

Abstract Ectoine has gained considerable attention as a high-value chemical with significant application potential and market demand. This study aimed to increase ectoine yields by blocking the metabolic shunt pathway of l -aspartate-4-semialdehyde, the precursor substrate in ectoine synthesis. The homoserine dehydrogenase encoded by hom in H. campaniensis strain XH26 is responsible for the metabolic shunt of l -aspartate-4-semialdehyde to glycine. CRISPR/Cas9 technology was used to seamlessly knockout hom , blocking the metabolic shunt pathway to increase ectoine yields. The ectoine yield of XH26/ Δhom was 351.13 mg (g CDW) −1 after 48 h of incubation in 500 mL shake flasks using optimal medium with 1.5 mol L −1 NaCl, which was significantly higher than the 239.18 mg (g CDW) −1 of the wild-type strain. Additionally, the absence of the ectoine metabolic shunt pathway affects betaine synthesis, and thus the betaine yields of XH26/ Δhom was 19.98 mg (g CDW) −1 , considerably lower than the 69.58 mg (g CDW) −1 of the wild-type strain. Batch fermentation parameters were optimized, and the wild-type strain and XH26 /Δhom were fermented in 3 L fermenters, resulting in a high ectoine yield of 587.09 mg (g CDW) −1 for the defective strain, which was significantly greater than the ectoine yield of 385.03 mg (g CDW) −1 of the wild-type strain. This study showed that blocking the metabolic shunt of synthetic substrates effectively increases ectoine production, and a reduction in the competitively compatible solute betaine appears to promote increased ectoine synthesis.

Topics & Concepts

EctoineBetaineFermentationBiochemistryStrain (injury)Wild typeMetabolic pathwayMetabolic engineeringHalomonasOsmoprotectantChemistryFood scienceBiologyMutantMetabolismProlineEnzymeAmino acidGeneAnatomy16S ribosomal RNAMicrobial Metabolic Engineering and BioproductionEnzyme Structure and FunctionProtein Structure and Dynamics